25NL - again, missing out on value?

The hand before villain had shown down TPNK on a very coordinated board.

Texas Hold'em $0.25-$0.25 PL (Real Money), #1,004,291,181
Table Laredo, 15 Sep 2006 12:42 PM ET
Seat 1: PokerPuzzle ($24.90 in chips)
Seat 2: --Ace High ($6.10 in chips)
Seat 3: smitto ($15 in chips)
Seat 4: tonzori ($23.85 in chips)
Seat 5: takedo13 ($22.65 in chips)
Seat 6: AussieAsh ($33.65 in chips)
Seat 7: gofrank150 ($28.70 in chips)
Seat 8: jocafeca ($12.10 in chips)
Seat 9: swiggidy ($26.25 in chips)
Seat 10: -OTT- ($37.95 in chips)
ANTES/BLINDS
AussieAsh posts blind ($0.25), gofrank150 posts blind ($0.25).

swiggidy is dealt [ :Qd:,:Qs: ]

PRE-FLOP
jocafeca calls $0.25, swiggidy bets $1.25, 8 folds, jocafeca calls $1.

FLOP [board cards :As:,, ]
jocafeca checks, swiggidy bets $1.50, jocafeca calls $1.50.

TURN [board cards AS,8S,9S,:Ac: ]
jocafeca bets $2, swiggidy calls $2.

RIVER [board cards AS,8S,9S,AC, ]
jocafeca bets $1, swiggidy calls $1.

On the flop I figure I have to take a shot, and I still have that flush draw. On the turn it is blatantly obvious he has the A, but I have 2 Qs plus the flush draw for 10 outs, and I'm getting 3:1, easy call.
This is PL, so I should just pot it for ~$10 and expect a call? I suck at maximizing river value. I all of the sudden worry about Ks or A9, A8, A2.

I pot the river.

Since youre dealing with a shorty....I try and get all his chips in when the river hits.